Job Title: Senior Computational Biologist, Spatial Genomics

Reports To: STOmics Manager

Department: Single-Cell Research

Location: San Jose, California

Job Summary

This position is for a Bioinformatics scientist to develop analytical pipelines to integrate spatial transcriptomics and proteomics data to gain more biological insights that are not accessible using transcriptomics or proteomics data alone. The ideal candidate will have experience with analyzing single-cell or spatial multi-omics data. We are seeking motivated and creative individuals who can work closely with peer scientists from cross-functional teams to analyze spatial multi-omics data, and provide solid bioinformatic support to R&D team.

Major Duties and Responsibilities

• Develop and standardize processing and analytical pipelines for spatial transcriptomics and proteomics data integration, including quality control and in-depth data mining.
• Collaborate with peer scientists from cross-functional teams to analyze and interpret muti-omics datasets, and support wet-lab scientists on technology development.
• Meet production deadlines for data analysis and be able to manage multiple projects
• Cross-team collaboration to develop multi-omics data visualization tools and user interface.

Minimum Qualifications

• Master's or Ph.D. in Bioinformatics, Computational Biology, or closely related discipline.
• 3-5 years of relevant work experience, or equivalent combination of education and experience.
• Experience in analyzing large NGS datasets.

Preferred Qualifications

• Experience with analyzing spatial transcriptomics data (Visium, MERFISH, In situ sequencing etc.), or imaging data.
• Experience with analyzing Nanostring GeoMx® DSP, CosMx™ SMI or Akoya CODEX ® data.
• Experience with analyzing diverse types of NGS data, especially RNA-Seq and/or CITE-seq data.
• Experience with images and development of image analysis tools.

Benefits

Complete Genomics offers its eligible employees and their dependents (including domestic partners) a comprehensive and competitive benefits package. Complete Genomics contributes to the benefits package.

• Medical, Dental and Vision Coverage
• Life and AD&D Insurance
• Long-term and Short-term Disability Insurance
• Voluntary Life and AD&D Insurance
• Health Savings Account (HSA)
• Flexible Spending Accounts (FSA)
• Domestic Partner Benefits
• Commuter Program
• Employee Assistance Program
• 401(k) Retirement Plan
• 20 PTO days and 11 holidays per year

About Us

Complete Genomics is a leading producer of advanced genomic sequencing technologies, and its multi-omics platforms include genetic sequencing, mass spectrometry, and laboratory automation based in San Jose, California. Using our proprietary sequencing instruments, chemistry, and software, Complete Genomics is committed to building core tools and technology to lead life science through intelligent innovation.

Complete Genomics focuses on R&D, production and sales of DNA sequencing instruments, reagents and related products to support life science research, agriculture, precession medicine and healthcare. With thousands of instruments worldwide, our proven technologies and products are well accepted by the scientific research community and clinical diagnostic customers.

We are currently one of the fastest growing biotechnology companies in the United States with 100+ employees spanning multiple scientific, engineering and technical specialties working in R&D, production and sales of DNA sequencing instruments, advanced robotic sample preparation, reagents, and related products to support life science research, agriculture, precision medicine and healthcare.

Complete Genomics does not accept unsolicited agency resumes. Please do not forward unsolicited agency resume to our website, employees or Human Resources.

Complete Genomics will not pay fees to any third-party agency or firm and will not be responsible for any agency fees associated with unsolicited resumes. Unsolicited resumes received will be considered property of Complete Genomics and will be processed accordingly without fee.

Complete Genomics has the sole discretion to determine with whom we will enter into a contract.

Complete Genomics provides equal employment opportunity without regard to race, color, religion, sex, national origin, sexual orientation, gender identity and/or expression, age, disability, veteran or uniformed service status, or any other characteristic protected by applicable law.